Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs144457769 chr21:44239295 G/GTAAA 0.000203 285 25.58 34.28 13.07 KM Plot
KIRP rs144499053 chr10:88222549 AAC/A 5.8E-8 285 26.38 23.1 9.77 KM Plot
KIRP rs144679626 chr21:44247527 A/G 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs144969912 chr6:27616843 C/T 1.21E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs145084342 chr13:45006851 TA/T 8.22E-8 286 26.57 22.37 9.72 KM Plot
KIRP rs145173773 chr10:43486295 AG/A 4.51E-5 287 25.7 26.4 11.43 KM Plot
KIRP rs145370898 chr17:80793293 ATTTC/A 2.35E-9 283 26.28 25.55 16.4 KM Plot
KIRP rs1454772 chr3:16040914 T/C 8.16E-5 287 20.4 26.57 25.6 KM Plot
KIRP rs145736591 chr14:43733641 T/C 2.92E-6 288 26.57 17.35 13.17 KM Plot
KIRP rs145950739 chr10:43513041 C/T 4.64E-5 288 25.63 25.95 11.43 KM Plot
KIRP rs146205169 chr10:43468440 A/AT 1.41E-5 281 26.37 24.67 11.43 KM Plot
KIRP rs146457367 chr10:75032100 CAAATAAAT/C 8.77E-15 289 26.37 22.8 5.6 KM Plot
KIRP rs146536255 chr12:45329115 T/A 9.59E-5 287 20.27 28.17 24.3 KM Plot
KIRP rs146657952 chr17:80807777 T/C 1.1E-8 280 26.37 25.5 16.4 KM Plot
KIRP rs146770398 chr13:46986308 A/T 4.91E-7 289 24.8 37.87 23.23 KM Plot